Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918003.1_cds_XP_016467532.1_60270
CDS Infomation

[gene=LOC107790143] [db_xref=GeneID:107790143] [protein=chloride channel protein CLC-c-like] [protein_id=XP_016467532.1] [location=join(31597..31805,32917..33117,34089..34266,35238..35500,36065..36334,36852..37983,38437..38526)] [gbkey=CDS]
Sequence

ATGGAAGATCAAGGTGATATAGAGAATGAAGGAGGAGGAATTGGGGTGATGATAATGGAG
AATGGCAAAGATTTGGAGAGGAATATTTCAGCGGTTTCTGAGAGTGGTGTTAGACAGCCA
TTGCTTAGTTCTAAAAGCAGAGTCAATAATACCTCACAAATTGCTATTATAGGAGCCAAT
GTTTGCCCCATTGAAAGTCTTGATTATGAGATTATTGAAAATGACCTTTTCAAGCAAGAT
TGGAGATCTAGGAAAAAAGTCCAGATATTTCAATATATATTCCTAAAGTGGACACTTGTG
CTTCTTATTGGATTGAGTGTAGGGCTTGTTGGTTTCTTTTTAAACATAGCAGTGGAAAAT
ATTGCTGGCTTCAAGCTTCTGCTCATTAGTGACTTAATGCTTCAGGACAAGTATTTCCGT
GGATTTGCTGCTTATGCATGTTGCAATTTGGTTCTTGCGACTTGTGCTGGAATCCTATGT
GCATTTATTGCACCAGCAGCTGCAGGGTCAGGAATACCTGAAGTGAAAGCATATCTCAAT
GGTATCGATGCTCATTCCATTTTAGCTCCAAGTACTTTATTTGTGAAGATATTTGGTTCT
GCTTTGGGTGTTTCTGCTGGATTTGTTGTTGGCAAGGAAGGACCCATGGTCCATACTGGC
GCTTGCATAGCAAACTTGCTTGGACAGGGCGGCTCCCGCAAGTATCATCTGACTTGGAAG
TGGCTGAAGTATTTCAAAAATGACCGTGACCGTAGAGATTTGATCACTTGTGGTGCTGCA
GCTGGTGTTGCAGCTGCTTTCCGAGCCCCAGTCGGTGGTGTTCTTTTTGCTCTTGAAGAA
GTAGCCTCATGGTGGCGAAGTGCTCTTCTTTGGAGGACCTTCTTCTCGACTGCTGTAGTA
GCTATGGTGCTCAGATCTTTCATTGTATTCTGTCGGAGCGGGAAATGTGGACTATTTGGT
CAAGGAGGTTTGATAATGTATGATGTGAATTCAGGAGCACCTAATTATAACACTATAGAT
GTACTGGCAGTGTTGTTAATTGGAGTTCTTGGAGGCCTTCTCGGAAGCCTTTATAATTAT
CTAGTGGACAAGGTCCTCCGGACTTACAGCATCATTAATGAGAGGGGTCCTGCTTTCAAA
GTCTTGCTCGTAATGACCATTTCAATCCTGAGTTCTCTTTGCTCGTATGGTCTACCGTGG
TTTGCAACTTGCACACCATGTCCTGTAGGCTTGGAGGACAAGTGCCCTACTATAGGTCGC
TCTGGAAACTATAAGAATTTCCAGTGTCCAGCGGGGCATTACAATGATCTAGCCTCCCTG
TTTATGAATACCAATGATGACGCCATCCGCAATTTGTTTAGCTCAGATAATTCCAGCGAA
TTTCACCTCTCTTCGCTTTTTGTCTTCTTTGCTGGGGTATATTGCCTTGGCGTCGTTACT
TATGGAATTGCTATTCCCTCTGGGCTATTCATTCCCGTCATACTTGCCGGTGCCTCCTAT
GGACGTTTTGTTGGGACTGTCTTGGGTTCGATATCCAATCTTAATAACGGCCTCTTTGCT
CTCCTTGGTGCTGCTTCCTTCCTCGGGGGTACTATGAGGATGACGGTATCCATCTGTGTC
ATACTACTTGAGCTCACCGATGACCTGCTAATGCTTCCATTGGTGATGCTTGTGCTCCTT
ATTTCAAAGACTGTGGCTGATTGTTTTAACCATGGTGTCTATGACCAGATTGTGAAAATG
AAAGGCTTGCCTTATTTGGAAGCACACGCCGAACCATACATGAGGCAATTAGTTGCAGGA
GATGTTTGTTCAGGGCCTTTAATTACATTTTCAGGTGTTGAGAAGGTAGGGAACATAATA
CATGCTTTGAAGTTTACTAGACACAATGGGTTTCCCGTGATTGATGCACCGCCATTCTCA
GACGCGCCAGAGTTCTGTGGACTTGCTTTAAGGTCACACCTACTTGTTTTGCTCAAAGCA
AAGAAATTCACGAAACTAAGTGTATTGAGCGGCTCCAGTATTTTGAGGAGTTTTCATGCG
TTTGATTTCGCTAAGCCAGGATCGGGGAAGGGGCCTAAGCTCGAGGATTTGTCCTTCACC
GATGAGGAGATGGAAATGTATGTAGATCTCCATCCTGTCACAAATACATCTCCATACACA
GTAGTGGAAACCATGTCTCTGGCCAAAGCTGCAATCCTTTTTCGACAACTTGGTCTGAGA
CACTTGTGTGTTGTACCAAAAAAGACTACCGGGAGGGATCCAATAGTTGGAATTTTGACA
AGGCATGACTTTATGCCAGAACATATAAAGGGACTGTACCCACATTTGGTCCATCACAAG
TAG

Peptide Sequence

PEP ID

XP_016467532.1
PEP Infomation

PREDICTED: chloride channel protein CLC-c-like [Nicotiana tabacum]
Sequence

MEDQGDIENEGGGIGVMIMENGKDLERNISAVSESGVRQPLLSSKSRVNNTSQIAIIGAN
VCPIESLDYEIIENDLFKQDWRSRKKVQIFQYIFLKWTLVLLIGLSVGLVGFFLNIAVEN
IAGFKLLLISDLMLQDKYFRGFAAYACCNLVLATCAGILCAFIAPAAAGSGIPEVKAYLN
GIDAHSILAPSTLFVKIFGSALGVSAGFVVGKEGPMVHTGACIANLLGQGGSRKYHLTWK
WLKYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEVASWWRSALLWRTFFSTAVV
AMVLRSFIVFCRSGKCGLFGQGGLIMYDVNSGAPNYNTIDVLAVLLIGVLGGLLGSLYNY
LVDKVLRTYSIINERGPAFKVLLVMTISILSSLCSYGLPWFATCTPCPVGLEDKCPTIGR
SGNYKNFQCPAGHYNDLASLFMNTNDDAIRNLFSSDNSSEFHLSSLFVFFAGVYCLGVVT
YGIAIPSGLFIPVILAGASYGRFVGTVLGSISNLNNGLFALLGAASFLGGTMRMTVSICV
ILLELTDDLLMLPLVMLVLLISKTVADCFNHGVYDQIVKMKGLPYLEAHAEPYMRQLVAG
DVCSGPLITFSGVEKVGNIIHALKFTRHNGFPVIDAPPFSDAPEFCGLALRSHLLVLLKA
KKFTKLSVLSGSSILRSFHAFDFAKPGSGKGPKLEDLSFTDEEMEMYVDLHPVTNTSPYT
VVETMSLAKAAILFRQLGLRHLCVVPKKTTGRDPIVGILTRHDFMPEHIKGLYPHLVHHK

Transcript Sequence

Gene sequence data has not been registered.